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8 Payroll Errors and How to Avoid These Mistakes

To run a successful business, you need to have a strong grasp on how to do payroll, along with the system and processes in place. Employees must be paid, government forms filled and taxes submitted – all in a timely and accurate manner. In this article, we deep-dive into common errors and how to avoid it from the get-go.

Global Payroll

Milani Notshe

May 9, 2025

11 mins

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Milani Notshe

Research Specialist

Last Updated

June 3, 2025

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8 Common Payroll Errors, Consequences & How to Avoid Them

Key Takeaways

Payroll errors go beyond just small administrative oversights – they can have significant financial, legal, and reputational consequences for any business. In fact, research by Ernst & Young show that around 20% of payrolls contain errors every year, with each mistake costing an average of $291 to correct. Over time, these issues can snowball into bigger problems like underpayments, compliance violations, and a breakdown in employee trust, which can ultimately hurt your employee retention.

In this guide, we’ll explore the most common payroll mistakes and offer practical steps you can take to avoid them, helping you save time, money, and a whole lot of stress.

8 Common Payroll Errors

Payroll is a complex task, and even small mistakes can lead to big problems. Whether it’s misclassifying employees or failing to update employee records, these errors can create serious ripple effects throughout your business. Below, we’ll walk you through eight of the most common payroll mistakes that can cost you time, money, and legal issues.

1. Misclassifying Employees

Before an employee ever joins the payroll, you’ll need to classify the work relationship. This determination can have a major impact on what payroll documents and expenses you’ll be expected to submit. 

According to the Economic Policy Institute, this problem is incredibly commonplace: “The U.S. The Department of Labor found that between 10% and 30% of audited employers misclassified some workers and that up to 95% of workers who said they were misclassified as independent contractors were reclassified as employees following review.” 

While some businesses make the honest mistake of misclassifying employees as independent contractors, many others do it purposefully to avoid paying:

  • Employee benefits
  • Taxes
  • Worker’s compensation

In either case, misclassifying employees can deprive them of their rights and protections. Doing so might not only impact employee satisfaction and retention but also expose the company – especially an international company – to significant payroll penalties. 

For example, in California, Labor Code section 226.8 states that the willful misclassification of individuals as independent contractors may result in a civil penalty between $5,000 and $25,000. 

Pro Tip: Global employment experts like Playroll can provide free employee misclassification audits to help you mitigate the risks.

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2. Tax Filing Errors

Mistakes in tax deductions, reporting, or compliance with tax laws, such as failing to report taxable fringe benefits on W-2 forms, errors in tax calculations, or failure to file timely, can result in administrative burdens, IRS penalties, and interest charges. In 2025, the IRS continues to enforce strict compliance, and even minor errors can lead to substantial penalties.

According to the IRS, approximately 33% of employers make payroll errors each year, often resulting in avoidable amendments and penalties.

3. Incorrect Calculations

Mistakes in calculating wages, overtime, bonuses, or deductions can lead to overpayments or underpayments. These payroll discrepancies not only affect employee morale but also require time-consuming and costly payroll corrections. For example, Ernst & Young found that each payroll mistake costs an average of $291 to rectify.

4. Missing or Incorrect Employee Information

Incomplete or outdated employee records can cause discrepancies in pay and benefits. Omitting or entering critical details incorrectly like full name, tax identification number (e.g., NIF/NIE, Social Security number), or home address can delay payments and lead to compliance issues.

5. Failure to Update Employee Records 

Failing to keep employee information up-to-date, whether it’s changes in tax status, benefits, or personal details, can cause major payroll headaches and compliance problems. It’s easy to overlook these updates, but they’re crucial for making sure everything runs smoothly. Regular audits and updates to employee records are a must to avoid errors and ensure your payroll system stays accurate and compliant. For example, make sure to audit your records every time an employee leaves your company or you get a new joiner.

6. Non-Compliance with Labor Laws

Failure to adhere to labor laws, including minimum wage, overtime, and leave entitlements, can result in legal actions and financial penalties. In the United States, for example, non-compliance with the Fair Labor Standards Act (FLSA) can lead to significant legal and financial consequences for employers.

The FLSA establishes federal standards for minimum wage, overtime pay, recordkeeping, and youth employment. Violations of these standards can result in civil penalties, back wages, and even criminal prosecution.

7. Missed Payments and Payment Delays

One of the biggest payroll challenges is on time payments without delays or missed payments, which can quickly lead to unhappy employees, damaged trust, and in some cases, legal issues or fines. That’s why it’s so important to ensure your payments are both timely and accurate to keep things running smoothly and stay compliant. For example, in Germany, if employers don’t pay payroll taxes on time, they could face penalties of up to 10% of the unpaid amount each month, plus 0.5% interest on overdue payments.

8. New Hire Reporting Delays

Delaying the reporting of new hires to relevant authorities can result in penalties and issues with tax filings. For example, in the U.S., employers who fail to report new hires to relevant authorities may face civil penalties up to $25 per employee, escalating to $500 if the noncompliance results from a conspiracy between the employer and employee to avoid reporting.

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Consequences of Payroll Errors

Getting payroll right is key to staying compliant with labor laws, building trust, and protecting your company’s hard-earned reputation. Payroll mistakes can result in hefty fines, legal headaches, lower employee morale, and disruptions to your operations. Let’s take a closer look at these main consequences of payroll mistakes:

1. Financial Penalties

Payroll errors can lead to substantial financial penalties for employers, as well as financial losses for employees:

Fines from Tax Authorities

In the United States, the Internal Revenue Service (IRS) imposes penalties for late payroll tax deposits:

  • 1–5 days late: 2% penalty
  • 6–15 days late: 5% penalty
  • More than 15 days late: 10% penalty
  • More than 10 days after receiving a notice: 15% penalty

These penalties can accumulate rapidly, impacting the financial stability of a business.

Employee Financial Losses

Employees can also experience financial losses due to payroll errors. Underpayment can lead to difficulties in meeting personal financial obligations, such as paying bills or servicing loans. Conversely, overpayment errors may result in employers seeking to reclaim the excess amounts, which can cause financial strain and dissatisfaction among employees.

For instance, if an employee is underpaid, they may incur late fees on personal bills or loans due to insufficient funds. Similarly, if an overpayment occurs and the employer seeks reimbursement, the employee may face unexpected financial burdens.

2. Legal Issues 

Payroll errors can expose businesses to significant legal risks, including lawsuits, audits, and back pay obligations:

Misclassification of Employees

Incorrectly classifying employees as independent contractors can lead to severe legal consequences. Employers may be required to pay back wages, including overtime, and face civil penalties. For instance, under the Fair Labor Standards Act (FLSA), misclassified employees are entitled to back wages, including overtime pay for any hours worked over 40 per week. This can go back up to three years if the misclassification is proven to be intentional.

Failure to Report Garnishments

Employers are legally obligated to process wage garnishments, such as child support or tax levies, following federal and state laws. Failure to comply can result in legal penalties. For example, under Title III of the Consumer Credit Protection Act (CCPA), violations may lead to the reinstatement of a discharged employee, payment of back wages, and restoration of improperly garnished amounts.

3. Employee Dissatisfaction 

Payroll errors can have a big impact on employee satisfaction and retention. A 2022 poll by Paycom found that nearly 1 in 5 Americans had issues with their paycheck in the past year, which led to financial stress like missed bill payments, overdrafts, and having to skip necessities like groceries. Besides affecting employees’ finances, these mistakes also hurt their trust in their employer. In fact, 70% of workers said that missing a paycheck made them less satisfied with their job. Imagine an employee who depends on their paycheck to cover rent or bills.

A delay or mistake in payment could mean missing a rent or mortgage payment, resulting in late fees or even the risk of eviction. This kind of financial stress can really damage trust in the employer and may even push employees to look for jobs elsewhere.

4. Operational Inefficiencies 

Payroll mistakes can really throw a wrench in operations, wasting valuable time and resources that could be better spent on other important tasks. These inefficiencies not only bump up labor costs but also slow down overall productivity.

For example, just fixing missing or incorrect time punches can take about 26 minutes per employee, which adds up to a lot of wasted time across the company. On top of that, the financial cost of these errors is no small thing. Each payroll mistake typically costs around $291 to fix, covering both direct costs and the time spent on administrative tasks. To avoid these problems, businesses should think about taking proactive steps to spot and fix payroll errors before they become bigger issues.

Strategies to Avoid Payroll Mistakes

To keep payroll errors to a minimum and stay compliant, having solid prevention strategies in place is the most important first step. Here are some practical steps you can take to improve your payroll process:

Payroll Automation

Using payroll automation software can help cut down on human error and take care of calculations, tax filings, and payment processing automatically. Here are a few tools to consider:

  • Playroll: A global payroll provider that offers all-in-one payroll automation software, handling everything from validating to reconciling and preparing payroll data in real-time.
  • Rippling: Integrates HR, IT, and finance functions for comprehensive workforce management.
  • Gusto: Provides automated tax calculations and filings, along with employee self-service portals.
  • ADP: Offers scalable payroll solutions with global payroll capabilities.
  • Paycor: Combines payroll processing with workforce management tools.

Payroll Automation

Record Keeping

Keeping employee records accurate and up-to-date is crucial for smooth operations. Having all the right information, easily accessible, ensures you're staying compliant and avoiding errors. Some key details to keep track of include:

  • Tax Forms: W-4, I-9, and other relevant documents.
  • Time-Tracking Data: Precise records of hours worked, including any overtime.
  • Compensation Details: Information on wages, bonuses, and benefits.

Payroll Audits and Checks

Conducting regular payroll audits helps identify and correct errors early. A comprehensive payroll audit should include:

  • Verification of Employee Classifications: Ensure correct classification as exempt or non-exempt.
  • Review of Wage Calculations: Check for accuracy in hourly rates and overtime pay.
  • Examination of Tax Withholdings: Confirm proper deductions for federal, state, and local taxes.
  • Assessment of Compliance with Labor Laws: Ensure adherence to applicable labor regulations.

Outsourcing or Partnering with Payroll Solutions 

Outsourcing payroll to a trusted partner with global payroll specialists can bring several advantages:

  • Expertise: You’ll have access to professionals who are well-versed in payroll regulations across the globe.
  • Time Savings: With payroll taken care of, you can free up your internal team to focus on more important business tasks.
  • Risk Mitigation: By leaving payroll to the pros, you lower the risk of mistakes and compliance issues that can lead to costly problems.

Regular Training

Regular training is key to avoiding payroll errors that stem from outdated knowledge. Keeping your payroll team up to speed on the latest regulations and best practices helps ensure accuracy. Here’s how:

  • Stay Updated on Employment and Tax Laws: Make it a habit to review any changes to payroll regulations at the federal, state, and local levels.
  • Participate in Training Programs: Host workshops or seminars to help your team improve their skills and stay informed.
  • Implement Internal Training Sessions: Hold regular sessions within your company to keep your payroll staff sharp and knowledgeable.
  • Stay Compliant and Error-Free with Playroll

    Playroll offers a smart solution to help reduce payroll errors and stay compliant, no matter where your business operates. By bringing together data from different sources into one platform, Playroll automates key payroll tasks like validation, reconciliation, and approval workflows. This not only cuts down on manual errors but also boosts accuracy. The global payroll management platform gives you real-time insights into payroll data, making it easier to spot discrepancies and tackle any issues quickly before they escalate.

    Plus, Playroll helps with automated compliance checks, helping you stay on top of local tax rules and labor laws. With handy features like centralized audit trails and customizable reports, you can make better decisions for your business, reduce risks and stay focused on what matters.

    Book a chat with our team to find out how our automated payroll solutions can help your business.

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    ABOUT THE AUTHOR

    Milani Notshe

    Milani is a seasoned research and content specialist at Playroll, a leading Employer Of Record (EOR) provider. Backed by a strong background in Politics, Philosophy and Economics, she specializes in identifying emerging compliance and global HR trends to keep employers up to date on the global employment landscape.

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